Most of the microscope slides used in this course (and in the study of pathology) are tissue samples, which were embedded in paraffin wax. Six to 8 μm slices of these tissue samples were affixed to glass slides, stained with hematoxylin and eosin (H & E), and protected with a coverslip. In this laboratory period, you should become acquainted with the appearance of such routine preparations and be able to compare their staining characteristics with other procedures utilized (embedding in plastic, etc.). Get in the habit of looking at each slide at the lowest magnification to orient yourself prior to advancing to medium and high magnifications. You will not use the 100X oil immersion lens frequently, but you should learn how to use it properly during this lab period.
Slide B71 or B72, liver, pig and human (H&E). These slides are typical H&E-stained paraffin sections. After
getting an overview with the low magnification objective, study the section
more carefully with 10x and 40X lenses in place. Most of the blue color results
from the staining of nucleic acids (nuclei, nucleoli, cytoplasmic RNA). Because these organelles stain with the
cationic (basic) stain, hematoxylin, these are referred to as
basophilic structures. Note that most liver cells (hepatocytes) have
fairly large, rounded nuclei and a few cells contain two nuclei
(binucleated). Smaller, more dense
nuclei are seen clustered in some of the connective tissue spaces. These represent both fibroblasts and nucleated
blood cells (lymphocytes, monocytes).
Hepatocyte cytoplasm is pink (mildly acidophilic), and
cell margins can be seen. This is not always the case, but in the liver, small
canals and vascular channels serve to aid in delineating cells. Liver has very
little connective tissue, or collagenous fibers, which are stained lightly
pink. Note also the presence of red
blood cells, which are light red in color. Their diameter (~7 μm) also
serves as a guide for calculating the size of other tissue structures.
Slides A13 and B38, esophagus, monkey (H&E). These H & E sections show
somewhat greater variety of cell and tissue types than seen in sections of
liver. They have a multi-layered lining of epithelial cells. Note that the most
apical of these layers stains somewhat differently than the deepest layer of
cells. Beneath the epithelium is connective tissue (mostly fibers with small
numbers of cells) containing some smooth muscle and blood vessels. Peripheral to the connective tissue are
thick layers of skeletal muscle. Both skeletal and smooth muscle fibers are
densely packed with filaments (actin and myosin), which stain pink-to-red in
these sections.
Slide A45, skeletal muscle, longitudinal section, plastic, (H&E).
This tissue was embedded in plastic rather than paraffin, and sections can be
cut much thinner (1-2 μm) due to the hardness of the plastic. Compare the
appearance of skeletal muscle seen in this slide to that observed around the
upper esophagus in slides Slide A13 or B38. Note how clearly the
striations in muscle fibers can be seen in Slide A45.
Slide A92, coronary artery, cross-section, pig, (Trichrome). In addition to H & E stains, you will
examine some slides stained to highlight specific cellular components (e.g.,
PAS staining for carbohydrates, elastic tissue stains, and immunostained
preparations for specific proteins). This slide was stained with a trichrome
stain to allow distinction to be drawn between connective tissue fibers and
muscle fibers. In most trichromes, muscle fibers will be stained red and
collagenous tissue green (shown here) or blue. Nuclei are usually purple, and
nerve fibers have a gray color. The latter are scattered in the outer green
layer of connective tissue in the coronary artery slide.
Cells
The
cytoplasm, nucleus, and nucleolus are the most obvious parts of a cell, and a
major part of histology is concerned with the variation in appearance of these
parts in the different cells of the body.
As you study different cell types, keep in mind that sectioned material
is being observed and that the appearance of the cells may vary, depending upon
the plane of the section.
Slide C39, ovary, cat, (Trichrome). Most of the ova are located at
the periphery of the ovary right beneath the capsule or germinal epithelial
layer. They contain large nuclei in which the chromatin is often clumped.
Nucleoli are prominent, round, and dark staining. Each nucleus may not contain
a nucleolus in the section you are studying. This occurs when the section is
cut through the nucleus at a point not occupied by the nucleolus. Under high
dry or oil immersion, focus up and down with the fine adjustment and note the
granular appearance of the cytoplasm. The coarse granules are yolk granules,
which accumulate in the cytoplasm of the ovum during the early stages of
follicular growth.
Slide B72, liver, human, (H&E). Study
the liver (hepatic) parenchymal cells and observe some of their features. The
cells appear to be arranged in "cords" separated by spaces, but
three-dimensional re-constructions of the liver have shown that the cells are
actually aligned in broad plates or sheets. The spaces are the liver sinusoids,
and red blood cells can be seen in many of them. The hepatic cells are
polyhedral in shape and have round nuclei. Some cells are binucleated. The
cytoplasm is granular and may contain small clear areas previously occupied by
glycogen or fat droplets, which were dissolved during tissue processing.
Cytoplasmic pigment is unusually abundant in this preparation. Distinct cell
boundaries are present between some of the cells.
Slide A53/54, blood smear, human, (Wright's). Examine, under high dry
and oil immersion, the cells present in adult peripheral blood, which has been
spread on a slide and stained with Wright's stain. Distinguish between red blood
cells (erythrocytes) and white blood cells (leukocytes), but do not attempt to
identify the various types of white blood cells at this time. The size of blood
cells in a smear is larger than the size of blood cells observed in sections of
tissue processed by conventional techniques for light microscopy. One reason
for their larger size is that the cells spread when they contact the surface of
the slide. Another reason is that the alcohols used in tissue processing
dehydrate and shrink the blood cells in tissue sections.
The
basic unit of tissues and organs is the cell.
It can be seen in a wide variety of shapes and sizes, all of which
contain an array of inclusions and organelles. Some of these are readily
visible by light microscopy.
1. Nuclei,
Interphase: Most nuclei you will
see are in interphase stage of cell division. They contain variable amounts of
lightly stained (eu-) and heavily stained (hetero-) chromatin as
well as one or more nucleoli (usually). Observe their size, shape, and location
within the cells.
Slide A53 or A54, blood smear, human (Wright stain). Observe the variations in size (relative to
the cell), location and shape of the nuclei of the white blood cells. The white cells are larger and staining more
intensely (especially the nuclei) than the sea of surrounding red blood cells
(which are enucleate).
Slide B73, liver, monkey (H&E).
Nuclei are staining a deep blue.
Note both eu- and heterochromatin and nucleoli (staining much darker
blue than the surrounding nucleoplasm). Some cells contain two nuclei.
Slide A21, fibroblast, human, (H&E). Fibroblasts are the main cell type found in connective
tissue. They are stellate shaped cells
containing an oval nucleus. The cytoplasm
of these cells extends out from the nucleus as wispy processes and sometimes
isn’t very visible. Note the prominent
nucleoli present inside the nucleus of each fibroblast.

Figure 2: Diagram of the
basic architecture of a cell. Note the
location of the Rough Endoplasmic Reticulum and the Golgi apparatus within the
cell. Taken from: Junqueira and Carneiro,
Basic Histology, Text and Atlas, page 42, Figure 2-27.
2. Golgi apparatus: This organelle is
usually located in a “juxta-nuclear” position or right next to the
nucleus. See Figure 2. In H&E preps, the Golgi apparatus would
appear as a pale unstained region (negative image) in the cytoplasm above or
around the nucleus. Special stains are
required to visualize this organelle with the light microscope, but it can be
readily seen with EM.
Slide A3, Golgi apparatus, (silver stain). The epithelial cells lining the epididymal tubule have a
prominent Golgi apparatus. Here they
are stained a deep brown or black using a silver stain. The intensity of the staining varies across
the slide, some areas being too black and others a pale brown.
3. Rough endoplasmic reticulum: Secretory cells synthesizing protein typically contain large
amounts of rough endoplasmic reticulum (RER).
This material is seen at the light microscopic level as cytoplasmic
basophilia since the abundant RNA has an affinity for basic dyes (stains blue
in H&E preparations). This
organelle is usually located in the basal portion of the cell. See Figure 2.
Slide B84, pancreas, human, (H&E). The exocrine portion of this gland (majority of the gland) is
comprised of acinar cells, which are in the shape of round clusters
(grapes). If you look for the nuclei,
which are usually found in the basal aspect of the cells, you will see that
they are surrounded by deep blue or purple cytoplasm. The basophilia of the cytoplasm is due to the presence of RER in
this area of the acinar cell.
Slide B87, pancreas, alloxan and control rat, (H&E). Another example of basophilic staining near
the basal aspect of the pancreatic acinar cell.
Slide B51, intestine, monkey (H&E). Next to the cross section of the duodenum on the far left of the
slide, is a wedge of pancreatic tissue.
Note the intensity of the staining (deep purple nuclei and nucleoli,
bright pink cytoplasm) of the acinar cells.
Note the basophilia in the basal cytoplasm, due to the abundance of
RER.
4. Secretory granules: Usually
seen as large acidophilic (e.g. pink in H&E preparations) granules located
in the apical portions of secretory cells.
See Figure 3 below. They stain intensely because of their high protein
content.
Slide A19, lacrimal gland, human (H&E). Look for acidophilic granules in the apical portions of the
glandular profiles. They are staining
intensely pink in comparison to the basophilic nucleus and pale pink cytoplasm.
Slide A27, mast cells, mesentery, (T. blue and fuchsin). The tissue on this slide is a wedge of ovary
and its surrounding mesentery (loose areolar tissue). On low power, identify the dark purple staining cells dispersed
throughout the mesentery surrounding numerous tubular profiles of the
oviduct. The dark purple staining cells
are mast cells. On high power, look at
the cytoplasm of these cells and identify the granules. They almost completely mask the basophilic
nucleus and therefore, quite frequently look like a purple blob and mistaken as
a staining artifact.

Figure 3: Diagram of a cell
with secretory granules in the apical cytoplasm. Taken from: Junqueira
and Carneiro, Basic Histology, Text and Atlas, page 87, Figure 4-26.
Slide B32, submandibular gland, monkey, plastic (H&E). This tissue is a composite gland consisting
of both serous and mucous portions. On
low power (10X), find the dark pink-purple staining acinar profiles (serous
portions of the gland). Then at 40X,
identify the secretory granules in the apical cytoplasm that are staining
intensely acidophilic.
5. Intracellular fibrils and filaments: The
best examples of filaments composing a major component of the cytoplasm are the
actin and myosin filaments in muscle.
Large numbers of non-muscular cells contain smaller quantities of actin,
and possibly myosin, filaments, but these can only be visualized either at the
EM level or by using certain cytochemical or immunochemical methods.
Slide A46, skeletal muscle, diaphragm, longitudinal and
cross-sections (Fe Hem). Myofibrils can
be seen in the cross section of muscle.
The striations are formed due to the interactions between the actin and
myosin filaments and are easily visualized in this preparation.
1. Glycogen:
Glycogen is a prominent inclusion in certain cells, particularly muscle
and hepatocytes. It is dissolved by
routine histologic fixatives, but can be retained by using alcoholic
preservative solutions. If properly
preserved, glycogen can be stained using the PAS technique or Best’s Carmine. Ideally, control slides treated with
salivary amylase should accompany such tissues stained for glycogen since a
number of other substances stain positively with these procedures.
Slide BB37, heart, purkinje fibers, ox (Best’s Carmine). The cardiac muscle is staining a
reddish-orange color. In contrast, the
Purkinje fibers are staining intensely pink due to the large quantity of
glycogen in their sarcoplasm. Focus up
and down with the 40X objective to see the abundance of granules in the
cytoplasm.
Slide B74, liver (PAS). Study
the hepatic parenchymal cells under low power and then under high power to
observe the small, red staining, glycogen granules in the cytoplasm. Glycogen,
a polymer of glucose, is stored in the liver cells and serves as a depot from
which glucose can be released when needed for the metabolic activities of
cells. Large amounts of glycogen are stored in the liver and in skeletal
muscle.
Slide B73, liver (H&E).
Compare with the above slide.
The cytoplasm of the hepatocytes appears clear and vacuolated due to the
loss of glycogen during the fixation process.
2.
Melanin. Melanin is produced by
specialized cells called melanocytes, which
are located between
the cells of the lower epidermis. Melanocytes have elongated processes which
course between the epidermal cells and release their pigment to the
keratinocytes. Melanin is largely responsible for the color of the skin. Since
the number of melanocytes is about the same in all races, the differences in
skin color can be attributed to variation in the amount of pigment produced by
the melanocytes.
Slide A97, thin skin, human, pigmented & non-pigmented,
(H&E). This slide contains two sections of skin, unpigmented with
relatively few melanin-containing cells (left) and the pigmented, with much
melanin (right). Under low power, find
the epidermis of the section on the right. With high power, study the granules
of melanin pigment that are present in the epidermal cells and note that the
pigment is most abundant in the keratinocytes located near the dermis. Pigment
decreases in the keratinocytes as the stratum corneum is approached. The
stratum corneum is the layer of dead cells at the free surface of the skin.
Compare to the same area on the unpigmented section of skin.
Surface specializations
1. Cilia. Slide
B10, trachea, human, (H&E). Find the lumen of the trachea and
observe the ciliated pseudostratified columnar epithelium, which lines the
luminal surface. In some areas, the epithelium has been lost during tissue
processing. Under high power, note the fine, thread-like cilia, which extend
from the cellular apices into the tracheal lumen. In life, the cilia beat
toward the pharynx to help expel mucus and foreign material. Dark lines where
the cilia attach to the epithelial cells are occasionally visible. It has been
shown with the electron microscope that the dark line is composed of basal
bodies and that each basal body gives rise to a cilium.


Figure 4: Pseudostratified
columnar epithelia with cilia (C) on the apical surface of the cells (left
photograph). EM of Cilia in the right
photograph. Taken from:
Wheater’s Functional Histology, a text and colour atlas, p.
90, Figure 5.15.
2. Stereocilia. Slide
C22, epididymis, monkey, (H&E). Several cross sections of the duct
are present in this section. Find the lumen in one of the cross sections and
note the stereocilia, which project into the lumen from the epithelial cells.
Unlike cilia, stereocilia are non-motile and are not attached to basal bodies.
They are long cytoplasmic processes of the free surface of the cell, which
function in resorption of secretory material. Stereocilia often adhere to each
other and form tufts. The thin, dark line at the base of the stereocilia
represents an area where secretory material has collected.

Figure 5: Stereocilia
on the apical surface of cells from the epididymis. Taken from: Wheater’s
Functional Histology, a text and colour atlas, p. 91, Figure 5.17
3. Striated or brush border. Slide
B59, ileum, monkey, plastic, (H&E). Under low power, find the
epithelium lining the rounded villous projections of the ileum. With high
power, note the cells, which have large pale unstained areas within their
cytoplasm that appear to open into the lumen.
These are goblet cells and will be studied later. Focus up and down with
the fine adjustment and study the prominent pale pink, striated border at the
free surface. The striated border is found throughout the small intestine (as
well as several other locations) and is referred to as striated because it
appears to have vertical striations under oil immersion of the light
microscope. Electron micrographs show that the border is formed by cytoplasmic
extensions called microvilli. Microvilli of the small intestine are regularly
arranged and consistent in height (about 2μm), which resembles the
bristles on a brush, hence the other name, brush border. They greatly increase
the surface area of the cells and function in absorption. Certain enzymes,
which facilitate absorption, are present in the microvilli. Electron
micrographs show that a surface coat (glycocalyx or fuzzy coat) is present on
the microvilli. The surface coat contains carbohydrates, which stains vividly
pink when using PAS as the stain.



Figure 6:
Multiple microvilli form a striated border (SB) on the apical surface of
simple columnar epithelial cells of the GI tract. These cells are specialized for the process of absorption and the
microvilli increase the surface area of the cell several fold. The bottom two photographs are EMs. Taken from: Wheater’s Functional Histology, a text
and colour atlas, p. 91, Figure 5.16.