Nakagawa Laboratory


1)    Shanks NF, Savas JN, Maruo T, Cais O, Hirao A, Oe S, Ghosh A, Noda Y, Greger IH, Yates JR 3rd, Nakagawa T. Differences in AMPA and Kainate Receptor Interactomes Facilitate Identification of AMPA Receptor Auxiliary Subunit GSG1L. Cell Rep. 2012 Jun 28;1(6):590-8. Epub 2012 May 23. PubMed PMID: 22813734; PubMed Central PMCID: PMC3401968.
2)    Farina AN, Blain KY, Maruo T, Kwiatkowski W, Choe S, Nakagawa T. Separation of domain contacts is required for heterotetrameric assembly of functional NMDA receptors. J Neurosci. 2011 Mar 9;31(10):3565-79. PubMed PMID: 21389213; PubMed Central PMCID: PMC3063151.
3)    Nakagawa T, Hoogenraad CC. Lentiviral transgenesis. Methods Mol Biol. 2011;693:117-42. PubMed PMID: 21080278.
4)    Nakagawa T. The biochemistry, ultrastructure, and subunit assembly mechanism of AMPA receptors. Mol Neurobiol. 2010 Dec;42(3):161-84. Epub 2010 Nov 16. Review. PubMed PMID: 21080238; PubMed Central PMCID: PMC2992128.
5)    Comoletti D, Miller MT, Jeffries CM, Wilson J, Demeler B, Taylor P, Trewhella J, Nakagawa T. The macromolecular architecture of extracellular domain of alphaNRXN1: domain organization, flexibility, and insights into trans-synaptic disposition. Structure. 2010 Aug 11;18(8):1044-53. PubMed PMID: 20696403; PubMed  Central PMCID: PMC2948785.
6)    Shanks NF, Maruo T, Farina AN, Ellisman MH, Nakagawa T. Contribution of the global subunit structure and stargazin on the maturation of AMPA receptors. J Neurosci. 2010 Feb 17;30(7):2728-40. PubMed PMID: 20164357; PubMed Central PMCID: PMC2842908.
7)    Fischer A, Garcia-Rodriguez C, Geren I, Lou J, Marks JD, Nakagawa T, Montal M. Molecular architecture of botulinum neurotoxin E revealed by single particle electron microscopy. J Biol Chem. 2008 Feb 15;283(7):3997-4003. Epub 2007 Nov 20. PubMed PMID: 18032388.
8)    Cheng D, Hoogenraad CC, Rush J, Ramm E, Schlager MA, Duong DM, Xu P, Wijayawardana SR, Hanfelt J, Nakagawa T, Sheng M, Peng J. Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum. Mol Cell Proteomics. 2006 Jun;5(6):1158-70. Epub 2006 Feb 28. PubMed PMID: 16507876.
9)    Nakagawa T, Cheng Y, Sheng M, Walz T. Three-dimensional structure of an AMPA receptor without associated stargazin/TARP proteins. Biol Chem. 2006 Feb;387(2):179-87. PubMed PMID: 16497150.
10)Nakagawa T, Feliu-Mojer MI, Wulf P, Lois C, Sheng M, Hoogenraad CC. Generation of lentiviral transgenic rats expressing glutamate receptor interacting protein 1 (GRIP1) in brain, spinal cord and testis. J Neurosci Methods. 2006 Apr 15;152(1-2):1-9. Epub 2005 Sep 12. PubMed PMID: 16157387.
11)Chen X, Vinade L, Leapman RD, Petersen JD, Nakagawa T, Phillips TM, Sheng M, Reese TS. Mass of the postsynaptic density and enumeration of three key molecules. Proc Natl Acad Sci U S A. 2005 Aug 9;102(32):11551-6. Epub 2005 Aug 1. PubMed PMID: 16061821; PubMed Central PMCID: PMC1182136.
12)Takao K, Okamoto K, Nakagawa T, Neve RL, Nagai T, Miyawaki A, Hashikawa T, Kobayashi S, Hayashi Y. Visualization of synaptic Ca2+ /calmodulin-dependent protein kinase II activity in living neurons. J Neurosci. 2005 Mar 23;25(12):3107-12. PubMed PMID: 15788767.
13)Nakagawa T, Cheng Y, Ramm E, Sheng M, Walz T. Structure and different conformational states of native AMPA receptor complexes. Nature. 2005 Feb 3;433(7025):545-9. PubMed PMID: 15690046.
14)Nakagawa T, Futai K, Lashuel HA, Lo I, Okamoto K, Walz T, Hayashi Y, Sheng M. Quaternary structure, protein dynamics, and synaptic function of SAP97 controlled by L27 domain interactions. Neuron. 2004 Oct 28;44(3):453-67. PubMed PMID:15504326.
15)Nakagawa T, Engler JA, Sheng M. The dynamic turnover and functional roles of alpha-actinin in dendritic spines. Neuropharmacology. 2004 Oct;47(5):734-45. PubMed PMID: 15458845.
16)Schulz TW, Nakagawa T, Licznerski P, Pawlak V, Kolleker A, Rozov A, Kim J, Dittgen T, Köhr G, Sheng M, Seeburg PH, Osten P. Actin/alpha-actinin-dependent transport of AMPA receptors in dendritic spines: role of the PDZ-LIM protein RIL. J Neurosci. 2004 Sep 29;24(39):8584-94. PubMed PMID: 15456832.
17)Passafaro M, Nakagawa T, Sala C, Sheng M. Induction of dendritic spines by an extracellular domain of AMPA receptor subunit GluR2. Nature. 2003 Aug 7;424(6949):677-81. PubMed PMID: 12904794.
18)Sheng M, Nakagawa T. Neurobiology: glutamate receptors on the move. Nature. 2002 Jun 6;417(6889):601-2. PubMed PMID: 12050645.
19)Nakajima K, Takei Y, Tanaka Y, Nakagawa T, Nakata T, Noda Y, Setou M, Hirokawa N. Molecular motor KIF1C is not essential for mouse survival and motor-dependent retrograde Golgi apparatus-to-endoplasmic reticulum transport. Mol Cell Biol. 2002 Feb;22(3):866-73. PubMed PMID: 11784862; PubMed Central PMCID: PMC133549.
20)Zhao C, Takita J, Tanaka Y, Setou M, Nakagawa T, Takeda S, Yang HW, Terada S, Nakata T, Takei Y, Saito M, Tsuji S, Hayashi Y, Hirokawa N. Charcot-Marie-Tooth disease type 2A caused by mutation in a microtubule motor KIF1Bbeta. Cell. 2001 Jun 1;105(5):587-97. PubMed PMID: 11389829.
21)Nakagawa T, Sheng M. Neurobiology. A stargazer foretells the way to the synapse. Science. 2000 Dec 22;290(5500):2270-1. PubMed PMID: 11188726.
22)Nakagawa T, Setou M, Seog D, Ogasawara K, Dohmae N, Takio K, Hirokawa N. A novel motor, KIF13A, transports mannose-6-phosphate receptor to plasma membrane through direct interaction with AP-1 complex. Cell. 2000 Nov 10;103(4):569-81. PubMed PMID: 11106728.
23)Setou M, Nakagawa T, Seog DH, Hirokawa N. Kinesin superfamily motor protein KIF17 and mLin-10 in NMDA receptor-containing vesicle transport. Science. 2000 Jun 9;288(5472):1796-802. PubMed PMID: 10846156.
24)Nakagawa T, Tanaka Y, Matsuoka E, Kondo S, Okada Y, Noda Y, Kanai Y, Hirokawa N. Identification and classification of 16 new kinesin superfamily (KIF) proteins in mouse genome. Proc Natl Acad Sci U S A. 1997 Sep 2;94(18):9654-9. PubMed PMID: 9275178; PubMed Central PMCID: PMC23244.
25)Nakagawa T, Chen J, Zhang Z, Kanai Y, Hirokawa N. Two distinct functions of the carboxyl-terminal tail domain of NF-M upon neurofilament assembly: cross-bridge formation and longitudinal elongation of filaments. J Cell Biol. 1995 Apr;129(2):411-29. PubMed PMID: 7721944; PubMed Central PMCID: PMC2199923. 


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